How to load the Biospytial Knowledge Engine

Biospytial is composed of three interconnected components:

All these components are implemented in Docker containers. A docker compose file for Linux and OSX can be downloaded from the source code.

Assuming you have downloaded the code from the repository you may be able to load the full service using the following command.

If it’s a Linux host:

docker stack deploy -c biospytial_stack.yml biospytial


If it’s an OSX host:

docker stack deploy -c biospytial_stackOSX.yml biospytial

Stoping the services

To stop the services run:

docker stack rm biospytial